STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000373625_02567Unannotated protein. (78 aa)    
Predicted Functional Partners:
GCA_000373625_02566
Unannotated protein.
 
 
 0.999
GCA_000373625_02568
Unannotated protein.
 
 
 0.999
GCA_000373625_04001
Unannotated protein.
  
 
 0.999
GCA_000373625_02571
Unannotated protein.
 
 
 0.997
GCA_000373625_02589
Unannotated protein.
 
 
 0.997
GCA_000373625_00201
Unannotated protein.
   
 
 0.995
GCA_000373625_00213
Unannotated protein.
   
 
 0.995
GCA_000373625_00225
Unannotated protein.
  
 
 0.995
GCA_000373625_04004
Unannotated protein.
 
 
 0.995
GCA_000373625_00186
Unannotated protein.
   
 
 0.994
Your Current Organism:
Streptomyces sp. LaPpAH108
NCBI taxonomy Id: 1155714
Other names: S. sp. LaPpAH-108, Streptomyces sp. LaPpAH-108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.