STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000373625_02753Unannotated protein. (358 aa)    
Predicted Functional Partners:
GCA_000373625_02755
Unannotated protein.
 
   
 0.977
GCA_000373625_02754
Unannotated protein.
 
  
 0.959
GCA_000373625_03138
Unannotated protein.
    
 0.944
GCA_000373625_00822
Unannotated protein.
   
 0.937
GCA_000373625_04792
Unannotated protein.
   
 0.916
GCA_000373625_00478
Unannotated protein.
   
 
 0.905
GCA_000373625_06091
Unannotated protein.
     
 0.904
GCA_000373625_05165
Unannotated protein.
   
 
 0.895
GCA_000373625_02752
Unannotated protein.
     
 0.862
GCA_000373625_00345
Unannotated protein.
    
 0.801
Your Current Organism:
Streptomyces sp. LaPpAH108
NCBI taxonomy Id: 1155714
Other names: S. sp. LaPpAH-108, Streptomyces sp. LaPpAH-108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.