STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000373625_03698Unannotated protein. (439 aa)    
Predicted Functional Partners:
GCA_000373625_02832
Unannotated protein.
    
  0.805
GCA_000373625_03697
Unannotated protein.
       0.795
GCA_000373625_05578
Unannotated protein.
 
    0.795
GCA_000373625_02027
Unannotated protein.
    
 0.784
GCA_000373625_05066
Unannotated protein.
  
 0.746
GCA_000373625_01897
Unannotated protein.
    
  0.724
GCA_000373625_04820
Unannotated protein.
    
  0.724
GCA_000373625_02747
Unannotated protein.
  
 
 0.723
GCA_000373625_02748
Unannotated protein.
  
 
 0.722
GCA_000373625_00147
Unannotated protein.
    
 0.687
Your Current Organism:
Streptomyces sp. LaPpAH108
NCBI taxonomy Id: 1155714
Other names: S. sp. LaPpAH-108, Streptomyces sp. LaPpAH-108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.