STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000373625_05694Unannotated protein. (264 aa)    
Predicted Functional Partners:
GCA_000373625_05695
Unannotated protein.
       0.729
GCA_000373625_05696
Unannotated protein.
       0.658
GCA_000373625_02854
Unannotated protein.
  
  0.652
GCA_000373625_03241
Unannotated protein.
  
  0.629
GCA_000373625_05699
Unannotated protein.
       0.599
GCA_000373625_03765
Unannotated protein.
  
  0.589
GCA_000373625_05144
Unannotated protein.
       0.570
GCA_000373625_05687
Unannotated protein.
       0.570
GCA_000373625_05701
Unannotated protein.
       0.570
GCA_000373625_01239
Unannotated protein.
   
  0.554
Your Current Organism:
Streptomyces sp. LaPpAH108
NCBI taxonomy Id: 1155714
Other names: S. sp. LaPpAH-108, Streptomyces sp. LaPpAH-108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.