Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| aroA | aroF | BANAU_2901 | BANAU_2238 | Bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.998 |
| aroA | pabA | BANAU_2901 | BANAU_0075 | Bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase. | Para-aminobenzoate synthase glutamine amidotransferase chain B. | 0.896 |
| aroA | pabB | BANAU_2901 | BANAU_0074 | Bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase. | Para aminobenzoate synthase chainA PabA,involved in biofilm formation. | 0.893 |
| aroA | trpA | BANAU_2901 | BANAU_2230 | Bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase. | Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.492 |
| aroA | trpB | BANAU_2901 | BANAU_2231 | Bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase. | Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.404 |
| aroA | trpC | BANAU_2901 | BANAU_2233 | Bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase. | Indole-3-glycerol-phosphate synthase; Belongs to the TrpC family. | 0.536 |
| aroA | trpD | BANAU_2901 | BANAU_2234 | Bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.530 |
| aroA | trpF | BANAU_2901 | BANAU_2232 | Bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase. | N-(5'-phosphoribosyl)anthranilate isomerase; Belongs to the TrpF family. | 0.451 |
| aroF | aroA | BANAU_2238 | BANAU_2901 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase. | 0.998 |
| aroF | pabA | BANAU_2238 | BANAU_0075 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Para-aminobenzoate synthase glutamine amidotransferase chain B. | 0.908 |
| aroF | pabB | BANAU_2238 | BANAU_0074 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Para aminobenzoate synthase chainA PabA,involved in biofilm formation. | 0.914 |
| aroF | trpA | BANAU_2238 | BANAU_2230 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.884 |
| aroF | trpB | BANAU_2238 | BANAU_2231 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.772 |
| aroF | trpC | BANAU_2238 | BANAU_2233 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Indole-3-glycerol-phosphate synthase; Belongs to the TrpC family. | 0.702 |
| aroF | trpD | BANAU_2238 | BANAU_2234 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.767 |
| aroF | trpF | BANAU_2238 | BANAU_2232 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | N-(5'-phosphoribosyl)anthranilate isomerase; Belongs to the TrpF family. | 0.609 |
| pabA | aroA | BANAU_0075 | BANAU_2901 | Para-aminobenzoate synthase glutamine amidotransferase chain B. | Bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase. | 0.896 |
| pabA | aroF | BANAU_0075 | BANAU_2238 | Para-aminobenzoate synthase glutamine amidotransferase chain B. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.908 |
| pabA | pabB | BANAU_0075 | BANAU_0074 | Para-aminobenzoate synthase glutamine amidotransferase chain B. | Para aminobenzoate synthase chainA PabA,involved in biofilm formation. | 0.999 |
| pabA | pabC | BANAU_0075 | BANAU_0076 | Para-aminobenzoate synthase glutamine amidotransferase chain B. | Aminodeoxychorismate lyase PabC. | 0.989 |
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