STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDRG_14196Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog; Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins. (340 aa)    
Predicted Functional Partners:
SDRG_03797
Uncharacterized protein.
    
 0.979
SDRG_12823
FeS_assembly_P domain-containing protein.
    
 0.972
SDRG_06623
Fe_hyd_SSU domain-containing protein; Belongs to the NARF family.
    
 0.867
SDRG_05504
DNA excision repair protein ERCC-2.
    
 0.822
SDRG_01844
DNA polymerase.
    
 0.717
SDRG_16396
Helicase ATP-binding domain-containing protein.
    
 0.555
SDRG_16908
Helicase ATP-binding domain-containing protein.
    
 0.555
SDRG_10326
Uncharacterized protein.
    
 0.555
SDRG_07147
WD_REPEATS_REGION domain-containing protein.
  
   
 0.554
SDRG_09658
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
    
 0.512
Your Current Organism:
Saprolegnia diclina
NCBI taxonomy Id: 1156394
Other names: S. diclina VS20, Saprolegnia declina VS20, Saprolegnia diclina VS20
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