STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDRG_13710Uncharacterized protein. (887 aa)    
Predicted Functional Partners:
SDRG_14436
IFT81_CH domain-containing protein.
    
 0.703
SDRG_07166
Uncharacterized protein.
    
  0.682
SDRG_04856
Uncharacterized protein.
    
 0.670
SDRG_16376
Uncharacterized protein.
    
 0.667
SDRG_00528
Uncharacterized protein.
    
  0.657
SDRG_05637
Uncharacterized protein.
    
 0.647
SDRG_03176
WD_REPEATS_REGION domain-containing protein.
    
 0.636
SDRG_07976
Uncharacterized protein.
    
 0.631
SDRG_01887
Serine/threonine-protein phosphatase.
    
  0.627
SDRG_02682
Uncharacterized protein.
    
 0.619
Your Current Organism:
Saprolegnia diclina
NCBI taxonomy Id: 1156394
Other names: S. diclina VS20, Saprolegnia declina VS20, Saprolegnia diclina VS20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.