STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDRG_12243L51_S25_CI-B8 domain-containing protein. (134 aa)    
Predicted Functional Partners:
SDRG_10201
Uncharacterized protein.
   
 
 0.993
SDRG_08434
Nudix hydrolase domain-containing protein.
   
 
 0.993
SDRG_15581
Uncharacterized protein.
   
 
 0.992
SDRG_15534
Uncharacterized protein.
   
 
 0.991
SDRG_08885
Uncharacterized protein.
   
 
 0.991
SDRG_15976
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
   
 
 0.990
SDRG_15863
50S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.989
SDRG_15017
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
 
 0.989
SDRG_01607
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
   
 
 0.989
SDRG_03466
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.989
Your Current Organism:
Saprolegnia diclina
NCBI taxonomy Id: 1156394
Other names: S. diclina VS20, Saprolegnia declina VS20, Saprolegnia diclina VS20
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