STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDRG_12507Uncharacterized protein. (233 aa)    
Predicted Functional Partners:
SDRG_02631
Autophagy-related protein.
    
 0.846
SDRG_10521
Uncharacterized protein.
     
 0.661
SDRG_07719
PH domain-containing protein.
     
 0.661
SDRG_12283
ULK/ULK protein kinase.
    
 0.645
SDRG_05852
ULK/ULK protein kinase.
    
 0.645
SDRG_00302
Protein kinase domain-containing protein.
    
 0.645
SDRG_05214
Ubiquitin-like protein ATG12.
     
 0.635
SDRG_00731
Autophagy protein 5; Involved in autophagic vesicle formation.
     
 0.634
SDRG_16678
Uncharacterized protein.
    
  0.582
SDRG_17128
Serine/threonine protein kinase.
    
  0.582
Your Current Organism:
Saprolegnia diclina
NCBI taxonomy Id: 1156394
Other names: S. diclina VS20, Saprolegnia declina VS20, Saprolegnia diclina VS20
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.