STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDRG_06489Uncharacterized protein; Belongs to the peptidase C1 family. (521 aa)    
Predicted Functional Partners:
SDRG_05017
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.539
SDRG_03251
Uncharacterized protein.
   
 
 0.518
SDRG_11764
40S ribosomal protein S14.
   
 0.509
SDRG_08873
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
  
 
0.493
SDRG_11321
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
  0.492
SDRG_06244
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
  0.492
SDRG_08674
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
   
 0.488
SDRG_16966
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
  
 
0.486
SDRG_07173
Uncharacterized protein.
    
  0.483
SDRG_07662
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
  
 
0.460
Your Current Organism:
Saprolegnia diclina
NCBI taxonomy Id: 1156394
Other names: S. diclina VS20, Saprolegnia declina VS20, Saprolegnia diclina VS20
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