STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDRG_06298Uncharacterized protein. (340 aa)    
Predicted Functional Partners:
SDRG_10447
Uncharacterized protein.
   
 0.987
SDRG_05631
50S ribosomal protein L31e.
   
 0.987
SDRG_02054
50S ribosomal protein L5e.
   
 0.987
SDRG_14043
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.986
SDRG_09544
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
   
 0.986
SDRG_08966
50S ribosomal protein L24e.
   
 0.986
SDRG_04641
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.986
SDRG_02055
50S ribosomal protein L14e.
   
 0.986
SDRG_15014
60S ribosomal protein L30.
   
 0.986
SDRG_01514
50S ribosomal protein L23Ae; Belongs to the universal ribosomal protein uL23 family.
   
 0.986
Your Current Organism:
Saprolegnia diclina
NCBI taxonomy Id: 1156394
Other names: S. diclina VS20, Saprolegnia declina VS20, Saprolegnia diclina VS20
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