STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDRG_05441AAA domain-containing protein. (1453 aa)    
Predicted Functional Partners:
SDRG_14073
Uncharacterized protein.
   
 0.999
SDRG_00363
DNA helicase; Belongs to the MCM family.
   
 0.999
SDRG_05992
Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.
   
0.999
SDRG_15564
ORC_WH_C domain-containing protein.
    
 0.998
SDRG_10161
AAA_16 domain-containing protein.
   
 0.998
SDRG_08416
Minichromosome maintenance protein 3; Belongs to the MCM family.
   
 0.998
SDRG_05340
ORC4_C domain-containing protein.
   
 0.998
SDRG_04649
DNA helicase; Belongs to the MCM family.
   
 0.998
SDRG_05532
Uncharacterized protein.
   
 0.996
SDRG_13744
Uncharacterized protein.
   
 0.994
Your Current Organism:
Saprolegnia diclina
NCBI taxonomy Id: 1156394
Other names: S. diclina VS20, Saprolegnia declina VS20, Saprolegnia diclina VS20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.