STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDRG_00541Stress-response A/B barrel domain-containing protein. (103 aa)    
Predicted Functional Partners:
SDRG_14973
Malate synthase; Belongs to the malate synthase family.
  
 
 0.768
SDRG_09564
Malate synthase; Belongs to the malate synthase family.
  
 
 0.768
SDRG_00667
Uncharacterized protein.
  
 
 0.768
SDRG_02101
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
  
 0.759
SDRG_17177
DAO domain-containing protein.
  
 0.757
SDRG_11327
Dimethylglycine dehydrogenase.
  
 0.757
SDRG_05305
Sarcosine dehydrogenase.
  
 0.757
SDRG_16764
Pyr_redox_2 domain-containing protein.
   
 0.731
SDRG_05866
Uncharacterized protein.
   
 0.731
SDRG_04574
Pyr_redox_2 domain-containing protein.
   
 0.731
Your Current Organism:
Saprolegnia diclina
NCBI taxonomy Id: 1156394
Other names: S. diclina VS20, Saprolegnia declina VS20, Saprolegnia diclina VS20
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