STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDRG_14146Cysteine synthase. (339 aa)    
Predicted Functional Partners:
SDRG_01279
Uncharacterized protein.
  
 0.944
SDRG_08624
Cystathionine beta-lyase.
  
 0.939
SDRG_03069
O-acetylhomoserine (Thiol)-lyase.
  
 0.917
SDRG_03308
Uncharacterized protein.
    
 0.893
SDRG_07195
Adenosylhomocysteinase.
  
 0.892
SDRG_02298
Tryptophan synthase alpha chain; Belongs to the TrpA family.
    
 0.882
SDRG_05398
Uncharacterized protein.
   
 0.880
SDRG_01564
Aspartate aminotransferase.
   
 0.875
SDRG_12936
CYTOSOL_AP domain-containing protein.
   
 0.864
SDRG_05633
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
 0.863
Your Current Organism:
Saprolegnia diclina
NCBI taxonomy Id: 1156394
Other names: S. diclina VS20, Saprolegnia declina VS20, Saprolegnia diclina VS20
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