Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDRG_01279 | SDRG_01564 | T0QSZ8 | T0R5E6 | Uncharacterized protein. | Aspartate aminotransferase. | 0.637 |
SDRG_01279 | SDRG_02298 | T0QSZ8 | T0R0C5 | Uncharacterized protein. | Tryptophan synthase alpha chain; Belongs to the TrpA family. | 0.839 |
SDRG_01279 | SDRG_03069 | T0QSZ8 | T0S3L3 | Uncharacterized protein. | O-acetylhomoserine (Thiol)-lyase. | 0.872 |
SDRG_01279 | SDRG_03308 | T0QSZ8 | T0QYG3 | Uncharacterized protein. | Uncharacterized protein. | 0.502 |
SDRG_01279 | SDRG_05398 | T0QSZ8 | T0S369 | Uncharacterized protein. | Uncharacterized protein. | 0.648 |
SDRG_01279 | SDRG_05633 | T0QSZ8 | T0QS17 | Uncharacterized protein. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.945 |
SDRG_01279 | SDRG_07195 | T0QSZ8 | T0RYX8 | Uncharacterized protein. | Adenosylhomocysteinase. | 0.914 |
SDRG_01279 | SDRG_08624 | T0QSZ8 | T0RNJ3 | Uncharacterized protein. | Cystathionine beta-lyase. | 0.876 |
SDRG_01279 | SDRG_14146 | T0QSZ8 | T0REM3 | Uncharacterized protein. | Cysteine synthase. | 0.944 |
SDRG_01564 | SDRG_01279 | T0R5E6 | T0QSZ8 | Aspartate aminotransferase. | Uncharacterized protein. | 0.637 |
SDRG_01564 | SDRG_02298 | T0R5E6 | T0R0C5 | Aspartate aminotransferase. | Tryptophan synthase alpha chain; Belongs to the TrpA family. | 0.461 |
SDRG_01564 | SDRG_03069 | T0R5E6 | T0S3L3 | Aspartate aminotransferase. | O-acetylhomoserine (Thiol)-lyase. | 0.877 |
SDRG_01564 | SDRG_03308 | T0R5E6 | T0QYG3 | Aspartate aminotransferase. | Uncharacterized protein. | 0.445 |
SDRG_01564 | SDRG_05398 | T0R5E6 | T0S369 | Aspartate aminotransferase. | Uncharacterized protein. | 0.884 |
SDRG_01564 | SDRG_05633 | T0R5E6 | T0QS17 | Aspartate aminotransferase. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.663 |
SDRG_01564 | SDRG_08624 | T0R5E6 | T0RNJ3 | Aspartate aminotransferase. | Cystathionine beta-lyase. | 0.877 |
SDRG_01564 | SDRG_12936 | T0R5E6 | T0RAP6 | Aspartate aminotransferase. | CYTOSOL_AP domain-containing protein. | 0.912 |
SDRG_01564 | SDRG_14146 | T0R5E6 | T0REM3 | Aspartate aminotransferase. | Cysteine synthase. | 0.875 |
SDRG_02298 | SDRG_01279 | T0R0C5 | T0QSZ8 | Tryptophan synthase alpha chain; Belongs to the TrpA family. | Uncharacterized protein. | 0.839 |
SDRG_02298 | SDRG_01564 | T0R0C5 | T0R5E6 | Tryptophan synthase alpha chain; Belongs to the TrpA family. | Aspartate aminotransferase. | 0.461 |
page 1 of 5