STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDRG_09596DUF4110 domain-containing protein. (752 aa)    
Predicted Functional Partners:
SDRG_09869
Ribosomal RNA assembly protein.
    
   0.531
SDRG_07843
Uncharacterized protein.
   
    0.525
SDRG_08342
CBF domain-containing protein.
   
    0.523
SDRG_11498
Uncharacterized protein.
    
   0.522
SDRG_10533
Uncharacterized protein.
   
    0.512
SDRG_12899
WD_REPEATS_REGION domain-containing protein.
   
    0.510
SDRG_06631
Brix domain-containing protein.
   
    0.510
SDRG_12590
Bms1-type G domain-containing protein.
   
    0.504
SDRG_00222
WD_REPEATS_REGION domain-containing protein.
   
    0.497
SDRG_11763
Protein MAK16 homolog; Belongs to the MAK16 family.
   
    0.493
Your Current Organism:
Saprolegnia diclina
NCBI taxonomy Id: 1156394
Other names: S. diclina VS20, Saprolegnia declina VS20, Saprolegnia diclina VS20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.