STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DBT_0261Zinc ABC transporter, periplasmic-binding protein ZnuA; Belongs to the bacterial solute-binding protein 9 family. (293 aa)    
Predicted Functional Partners:
DBT_1049
Zinc ABC transporter, ATP-binding protein ZnuC.
 
 
 0.990
DBT_2145
Zinc ABC transporter, inner membrane permease protein ZnuB.
 
 
 0.987
DBT_1475
Dipeptide transport ATP-binding protein DppF.
  
 
 0.892
DBT_0260
GGDEF domain protein.
       0.773
DBT_1089
Ferrous iron transport protein A.
  
 
 0.760
DBT_0259
Hypothetical protein.
       0.723
DBT_1456
Vitamin B12 ABC transporter, ATPase component BtuD.
 
 
 0.694
DBT_0258
Putative signal transduction protein.
       0.684
DBT_2108
Iron-dependent repressor IdeR/DtxR.
  
 
 0.606
rpsZ
SSU ribosomal protein S14p (S29e); Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
  
  
 0.597
Your Current Organism:
Dissulfuribacter thermophilus
NCBI taxonomy Id: 1156395
Other names: D. thermophilus, DSM 25762, Dissulfuribacter thermophilus Slobodkin et al. 2013, VKM B-2760, delta proteobacterium S69, strain S69
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