STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DBT_0273Putative dioxygenase; Belongs to the MEMO1 family. (268 aa)    
Predicted Functional Partners:
DBT_1589
Hypothetical protein.
    0.988
DBT_1172
Radical SAM, Pyruvate-formate lyase-activating enzyme like.
     0.977
DBT_0274
Small-conductance mechanosensitive channel.
       0.773
DBT_0275
Sensor histidine kinase.
       0.773
DBT_0276
N-methylhydantoinase A.
       0.773
DBT_1739
Biotin synthesis protein BioC.
   
 
  0.427
DBT_1740
Hypothetical protein.
   
 
  0.427
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
  
    0.417
DBT_0272
Putative two-component system response regulator.
       0.406
Your Current Organism:
Dissulfuribacter thermophilus
NCBI taxonomy Id: 1156395
Other names: D. thermophilus, DSM 25762, Dissulfuribacter thermophilus Slobodkin et al. 2013, VKM B-2760, delta proteobacterium S69, strain S69
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