STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DBT_1078Hypothetical protein. (242 aa)    
Predicted Functional Partners:
DBT_1079
Putative transporter PduT for various metalloporphyrins.
  
    0.831
DBT_1081
Vitamin B12 ABC transporter, B12-binding component BtuF.
       0.818
DBT_1082
CobN component of cobalt chelatase involved in B12 biosynthesis.
  
    0.809
DBT_1080
Hypothetical protein.
       0.791
DBT_1077
TonB-dependent receptor.
       0.741
DBT_1076
Hypothetical protein.
       0.707
DBT_1083
MotA/TolQ/ExbB proton channel family protein.
  
    0.582
DBT_1075
Hypothetical protein.
       0.514
DBT_1084
Biopolymer transport protein ExbD/TolR.
       0.467
DBT_1085
Ferric siderophore transport system, periplasmic binding protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
       0.467
Your Current Organism:
Dissulfuribacter thermophilus
NCBI taxonomy Id: 1156395
Other names: D. thermophilus, DSM 25762, Dissulfuribacter thermophilus Slobodkin et al. 2013, VKM B-2760, delta proteobacterium S69, strain S69
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