STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
furPeroxide stress regulator PerR, FUR family; Belongs to the Fur family. (146 aa)    
Predicted Functional Partners:
DBT_1747
Glutamate synthase [NADPH] large chain.
    
 0.843
rpoA
DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
   0.687
DBT_1941
Alkyl hydroperoxide reductase subunit C-like protein.
  
  
 0.648
DBT_1940
Rubrerythrin.
  
  
 0.606
DBT_1089
Ferrous iron transport protein A.
  
  
 0.574
DBT_1939
Hypothetical protein.
       0.572
DBT_1100
Ferric uptake regulation protein FUR; Belongs to the Fur family.
  
   
 0.533
DBT_0653
Thioredoxin; Belongs to the thioredoxin family.
   
 
 0.501
DBT_1236
Hypothetical protein.
   
    0.487
DBT_0114
Biotin operon repressor / Biotin-protein ligase.
     
 0.471
Your Current Organism:
Dissulfuribacter thermophilus
NCBI taxonomy Id: 1156395
Other names: D. thermophilus, DSM 25762, Dissulfuribacter thermophilus Slobodkin et al. 2013, VKM B-2760, delta proteobacterium S69, strain S69
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.