STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tolBTolB protein precursor, periplasmic protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. (424 aa)    
Predicted Functional Partners:
pal
Peptidoglycan-associated lipoprotein precursor; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 0.991
cpoB
TPR repeat containing exported protein; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.
 
  
 0.980
DBT_1254
Outer membrane lipoprotein omp16 precursor.
 
 0.931
DBT_2139
Ferric siderophore transport system, periplasmic binding protein TonB.
 
 
 0.863
DBT_2000
Outer membrane protein.
   
   0.841
DBT_2140
Biopolymer transport protein ExbD/TolR.
 
  
 0.829
DBT_2142
MotA/TolQ/ExbB proton channel family protein.
 
  
 0.813
DBT_2136
Branched-chain amino acid ABC transporter, amino acid-binding protein.
  
    0.768
DBT_1402
Hypothetical protein.
 
  
 0.730
DBT_1266
TonB-dependent receptor.
    
 
 0.681
Your Current Organism:
Dissulfuribacter thermophilus
NCBI taxonomy Id: 1156395
Other names: D. thermophilus, DSM 25762, Dissulfuribacter thermophilus Slobodkin et al. 2013, VKM B-2760, delta proteobacterium S69, strain S69
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