STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DBT_2139Ferric siderophore transport system, periplasmic binding protein TonB. (304 aa)    
Predicted Functional Partners:
DBT_2140
Biopolymer transport protein ExbD/TolR.
 
 
 0.983
DBT_1285
Iron dicitrate transport regulator FecR.
  
 0.980
DBT_1284
Iron dicitrate transport regulator FecR.
  
 
 0.943
DBT_1084
Biopolymer transport protein ExbD/TolR.
  
 
 0.918
DBT_1266
TonB-dependent receptor.
   
 
 0.897
tolB
TolB protein precursor, periplasmic protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 
 0.863
DBT_2142
MotA/TolQ/ExbB proton channel family protein.
 
 
 0.803
DBT_0374
Hypothetical protein.
  
 
 0.760
DBT_1083
MotA/TolQ/ExbB proton channel family protein.
  
 
 0.757
metG
Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
    
  0.697
Your Current Organism:
Dissulfuribacter thermophilus
NCBI taxonomy Id: 1156395
Other names: D. thermophilus, DSM 25762, Dissulfuribacter thermophilus Slobodkin et al. 2013, VKM B-2760, delta proteobacterium S69, strain S69
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