STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DBT_2309Xaa-Pro aminopeptidase. (411 aa)    
Predicted Functional Partners:
DBT_2307
UPF0047 protein Bsu YugU.
       0.773
DBT_2308
Membrane-bound lytic murein transglycosylase B precursor.
       0.773
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
 0.626
DBT_2311
DNA polymerase III alpha subunit.
       0.625
DBT_2312
Hypothetical protein.
       0.605
DBT_1178
Pyridine nucleotide-disulfide oxidoreductase.
 
  
 0.603
DBT_1115
Hypothetical protein.
  
 
 0.596
DBT_2305
Sensor histidine kinase.
       0.569
DBT_2306
HDIG domain protein.
       0.547
DBT_0848
Peptidase T.
  
 
 0.532
Your Current Organism:
Dissulfuribacter thermophilus
NCBI taxonomy Id: 1156395
Other names: D. thermophilus, DSM 25762, Dissulfuribacter thermophilus Slobodkin et al. 2013, VKM B-2760, delta proteobacterium S69, strain S69
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.