STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGG80255.1Spore gernimation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (427 aa)    
Predicted Functional Partners:
PdaB
Deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
 0.808
KGG79692.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.594
KGG79693.1
Spore gernimation protein KA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.582
KGG79690.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.578
KGG80256.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.561
KGG80257.1
Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.561
KGG80234.1
Peptidase M14; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.523
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
       0.520
KGG79814.1
2'-5' RNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.462
KGG81250.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.453
Your Current Organism:
Caloranaerobacter azorensis
NCBI taxonomy Id: 1156417
Other names: C. azorensis H53214, Caloranaerobacter azorensis H53214, Caloranaerobacter sp. H53214
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.