STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGY38686.1GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (166 aa)    
Predicted Functional Partners:
AGY38688.1
UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
       0.805
AGY38687.1
GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.757
AGY38689.1
Cystathionine gamma-synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.672
mltG
Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.
       0.652
AGY38690.1
RNA helicase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.573
greA
Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.
       0.546
AGY38695.1
DNA helicase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.410
Your Current Organism:
Streptococcus sp. IP16
NCBI taxonomy Id: 1156433
Other names: S. sp. I-P16, Streptococcus sp. I-P16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.