STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000373565_00319Unannotated protein. (216 aa)    
Predicted Functional Partners:
GCA_000373565_00318
Unannotated protein.
 0.987
GCA_000373565_06430
Unannotated protein.
  
 
 0.928
GCA_000373565_04713
Unannotated protein.
  
  
 
0.922
GCA_000373565_08313
Unannotated protein.
  
  
  0.913
GCA_000373565_07939
Unannotated protein.
   
 
 0.912
GCA_000373565_03393
Unannotated protein.
    
 0.908
GCA_000373565_07941
Unannotated protein.
     
 0.905
GCA_000373565_07473
Unannotated protein.
  
 
  0.904
GCA_000373565_06700
Unannotated protein.
 
 
 0.888
GCA_000373565_06704
Unannotated protein.
 
 0.878
Your Current Organism:
Streptomyces sp. HmicA12
NCBI taxonomy Id: 1156844
Other names: S. sp. HmicA12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.