STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000373565_01460Unannotated protein. (475 aa)    
Predicted Functional Partners:
GCA_000373565_01459
Unannotated protein.
 
  
 
0.850
GCA_000373565_01458
Unannotated protein.
 
  
 
0.820
GCA_000373565_01462
Unannotated protein.
 
  
 
0.805
GCA_000373565_01463
Unannotated protein.
 
  
 
0.786
GCA_000373565_01457
Unannotated protein.
 
  
 
0.759
GCA_000373565_01676
Unannotated protein.
  
 
  0.741
GCA_000373565_04494
Unannotated protein.
  
  
 
0.728
GCA_000373565_06837
Unannotated protein.
  
  
 
0.722
GCA_000373565_01557
Unannotated protein.
  
  
 
0.717
GCA_000373565_01383
Unannotated protein.
  
  
 
0.711
Your Current Organism:
Streptomyces sp. HmicA12
NCBI taxonomy Id: 1156844
Other names: S. sp. HmicA12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.