STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000373565_01642Unannotated protein. (402 aa)    
Predicted Functional Partners:
GCA_000373565_05436
Unannotated protein.
  
 
 0.929
GCA_000373565_02357
Unannotated protein.
     
 0.882
GCA_000373565_03266
Unannotated protein.
  
 
 0.826
GCA_000373565_00577
Unannotated protein.
     
 0.823
GCA_000373565_07369
Unannotated protein.
     
 0.823
GCA_000373565_05065
Unannotated protein.
    
  0.815
GCA_000373565_01643
Unannotated protein.
       0.811
GCA_000373565_07339
Unannotated protein.
   
 
  0.810
GCA_000373565_05308
Unannotated protein.
    
 0.807
GCA_000373565_05063
Unannotated protein.
    
 0.805
Your Current Organism:
Streptomyces sp. HmicA12
NCBI taxonomy Id: 1156844
Other names: S. sp. HmicA12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.