STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000373565_06791Unannotated protein. (751 aa)    
Predicted Functional Partners:
GCA_000373565_02833
Unannotated protein.
  
     0.545
GCA_000373565_06790
Unannotated protein.
       0.510
GCA_000373565_07587
Unannotated protein.
  
 
   0.510
GCA_000373565_08005
Unannotated protein.
  
     0.509
GCA_000373565_04436
Unannotated protein.
  
     0.492
GCA_000373565_05170
Unannotated protein.
  
     0.465
GCA_000373565_03833
Unannotated protein.
 
    0.459
GCA_000373565_03405
Unannotated protein.
  
   0.445
GCA_000373565_04035
Unannotated protein.
  
   0.445
GCA_000373565_04368
Unannotated protein.
  
   0.445
Your Current Organism:
Streptomyces sp. HmicA12
NCBI taxonomy Id: 1156844
Other names: S. sp. HmicA12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.