STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
QWC_05724COG0583 Transcriptional regulator. (181 aa)    
Predicted Functional Partners:
QWC_03563
HTH-type transcriptional activator TtdR; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.749
QWC_24747
COG0583 Transcriptional regulator.
  
     0.720
QWC_26578
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.717
QWC_16967
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.707
QWC_11681
COG0583 Transcriptional regulator.
  
     0.695
QWC_17947
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.693
QWC_24722
COG0583 Transcriptional regulator.
  
     0.676
QWC_12391
COG0583 Transcriptional regulator.
  
     0.672
QWC_17207
COG0583 Transcriptional regulator.
  
     0.663
QWC_18717
COG0583 Transcriptional regulator.
  
     0.653
Your Current Organism:
Achromobacter piechaudii
NCBI taxonomy Id: 1156919
Other names: A. piechaudii HLE, Achromobacter piechaudii HLE, Achromobacter piechaudii str. HLE, Achromobacter piechaudii strain HLE
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.