STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
QWC_12758COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components. (308 aa)    
Predicted Functional Partners:
QWC_12763
Binding-protein-dependent transporter inner membrane component family protein 4; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.955
QWC_12768
Extracellular solute-binding protein, family 5 middle family protein 1; COG0747 ABC-type dipeptide transport system, periplasmic component.
 
  0.937
QWC_14869
Extracellular solute-binding protein, family 5 middle family protein 12; COG0747 ABC-type dipeptide transport system, periplasmic component.
 
  0.906
QWC_22724
Extracellular solute-binding protein, family 5 middle family protein 4; COG0747 ABC-type dipeptide transport system, periplasmic component.
 
  0.906
QWC_14864
Binding-protein-dependent transporter inner membrane component family protein 26; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.905
QWC_22729
Binding-protein-dependent transporter inner membrane component family protein 9; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.905
QWC_25923
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.903
QWC_30986
Binding-protein-dependent transporter inner membrane component family protein 67; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.903
QWC_12753
ABC transporter; COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase; Belongs to the ABC transporter superfamily.
 
  0.902
QWC_14844
Oligopeptide/dipeptide abc transporter ATP-binding protein, c-terminal domain-containing protein 3; COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
  0.897
Your Current Organism:
Achromobacter piechaudii
NCBI taxonomy Id: 1156919
Other names: A. piechaudii HLE, Achromobacter piechaudii HLE, Achromobacter piechaudii str. HLE, Achromobacter piechaudii strain HLE
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.