STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MFUM_970037Unannotated protein. (389 aa)    
Predicted Functional Partners:
salY
Unannotated protein.
     0.988
MFUM_970040
Unannotated protein.
 
     0.736
salX
Unannotated protein.
     
 0.732
MFUM_970036
Unannotated protein.
       0.515
smtA-12
Unannotated protein.
  
  
  0.503
erg
Unannotated protein.
  
  
  0.494
MFUM_970041
Unannotated protein.
       0.444
wcaA-4
Unannotated protein.
  
  
 0.428
MFUM_270050
Unannotated protein.
  
     0.417
Your Current Organism:
Methylacidiphilum fumariolicum
NCBI taxonomy Id: 1156937
Other names: M. fumariolicum SolV, Methylacidiphilum fumariolicum SolV, Methylacidiphilum fumariolicum str. SolV, Methylacidiphilum fumariolicum strain SolV
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.