STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MFUM_1080004Unannotated protein. (387 aa)    
Predicted Functional Partners:
gltB
Unannotated protein.
    
 0.949
ydbK
Unannotated protein.
  
 
 0.944
metF
Unannotated protein.
  
 
 0.887
argG
Unannotated protein; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
   
 0.881
dfp
Unannotated protein.
  
  0.881
MFUM_290006
Unannotated protein.
  
 
 0.878
MFUM_800006
Unannotated protein.
   
 
 0.875
mdh
Unannotated protein; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
  
 0.871
hisC
Unannotated protein; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
 
 
0.866
lysC
Unannotated protein; Belongs to the aspartokinase family.
  
 0.859
Your Current Organism:
Methylacidiphilum fumariolicum
NCBI taxonomy Id: 1156937
Other names: M. fumariolicum SolV, Methylacidiphilum fumariolicum SolV, Methylacidiphilum fumariolicum str. SolV, Methylacidiphilum fumariolicum strain SolV
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.