STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EL26_02125Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (509 aa)    
Predicted Functional Partners:
EL26_02135
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.937
EL26_02130
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.934
EL26_04305
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.779
EL26_09060
SpoVAD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.777
EL26_04300
Stage V sporulation protein AC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.776
gpr
Spore gernimation protein; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
    0.776
EL26_11350
Peptidase S55; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
EL26_14520
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.774
EL26_04310
Stage V sporulation protein AEB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.773
EL26_09055
Stage V sporulation protein AEB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.773
Your Current Organism:
Tumebacillus flagellatus
NCBI taxonomy Id: 1157490
Other names: CGMCC 1.12170, DSM 25748, T. flagellatus, Tumebacillus flagellatus Wang et al. 2013, Tumebacillus sp. NFB, strain GST4
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