STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EL26_06525Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (134 aa)    
Predicted Functional Partners:
EL26_00295
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.620
EL26_02535
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.514
EL26_14310
Taurine catabolism dioxygenase TauD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.489
EL26_02000
3-mercaptopyruvate sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.484
EL26_07525
Taurine catabolism dioxygenase TauD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.484
EL26_18375
cobalt-precorrin-3B C(17)-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.470
EL26_00550
Ferredoxin--nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
     
 0.443
EL26_06520
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.429
EL26_07630
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.427
EL26_07645
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.427
Your Current Organism:
Tumebacillus flagellatus
NCBI taxonomy Id: 1157490
Other names: CGMCC 1.12170, DSM 25748, T. flagellatus, Tumebacillus flagellatus Wang et al. 2013, Tumebacillus sp. NFB, strain GST4
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