STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EL26_06665General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (173 aa)    
Predicted Functional Partners:
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
    
  0.777
EL26_22555
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.702
EL26_00760
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.561
EL26_06670
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.528
EL26_10725
Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.524
EL26_16200
Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.524
EL26_16915
Aminotransferase; Produces methionine from 2-keto-4-methylthiobutyrate and glutamine in vitro; mutations do not affect methionine salvage in vivo however; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.524
EL26_18815
Catalyzes the transamination of the aromatic amino acid forming a ketoacid; first step in aromatic amino acid degradation in lactococci; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.524
EL26_22755
Aminotransferase; Produces methionine from 2-keto-4-methylthiobutyrate and glutamine in vitro; mutations do not affect methionine salvage in vivo however; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.524
EL26_10440
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 2 family.
    
  0.503
Your Current Organism:
Tumebacillus flagellatus
NCBI taxonomy Id: 1157490
Other names: CGMCC 1.12170, DSM 25748, T. flagellatus, Tumebacillus flagellatus Wang et al. 2013, Tumebacillus sp. NFB, strain GST4
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