STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EL26_11475Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (72 aa)    
Predicted Functional Partners:
EL26_11480
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.818
EL26_11470
Hypothetical protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.
  
    0.817
EL26_13860
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.706
EL26_11675
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.674
EL26_11490
Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.
  
    0.662
EL26_11485
Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
  
    0.628
EL26_12375
RsfA family transcription factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.619
cinA
Damage-inducible protein CinA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family.
    
 0.592
EL26_19330
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.592
EL26_23280
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.580
Your Current Organism:
Tumebacillus flagellatus
NCBI taxonomy Id: 1157490
Other names: CGMCC 1.12170, DSM 25748, T. flagellatus, Tumebacillus flagellatus Wang et al. 2013, Tumebacillus sp. NFB, strain GST4
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