STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EL26_12020Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 57 family. (941 aa)    
Predicted Functional Partners:
EL26_12015
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.967
EL26_12025
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.953
EL26_22855
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.935
EL26_12040
Alpha-glucan phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.904
glgB
1,4-alpha-glucan branching protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 0.889
EL26_12000
Glycoside hydrolase family 15; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.836
EL26_03465
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.820
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
    
 0.806
EL26_01455
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.806
EL26_01465
Glycoside hydrolase family 15; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.800
Your Current Organism:
Tumebacillus flagellatus
NCBI taxonomy Id: 1157490
Other names: CGMCC 1.12170, DSM 25748, T. flagellatus, Tumebacillus flagellatus Wang et al. 2013, Tumebacillus sp. NFB, strain GST4
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