STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EL26_12125Protein prkA; Derived by automated computational analysis using gene prediction method: Protein Homology. (632 aa)    
Predicted Functional Partners:
EL26_12120
Stress response protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0229 family.
  
 0.995
EL26_12115
Stage V sporulation protein R; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.993
glgA
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
    0.721
EL26_08505
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
   
  
 0.648
EL26_07900
Glyoxal reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.624
EL26_20200
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.624
EL26_02640
Catalase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the catalase family.
   
  
 0.606
EL26_05500
Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.579
EL26_07065
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.501
EL26_12165
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.487
Your Current Organism:
Tumebacillus flagellatus
NCBI taxonomy Id: 1157490
Other names: CGMCC 1.12170, DSM 25748, T. flagellatus, Tumebacillus flagellatus Wang et al. 2013, Tumebacillus sp. NFB, strain GST4
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