STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EL26_12485Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (509 aa)    
Predicted Functional Partners:
EL26_12545
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.946
EL26_06230
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.804
EL26_12450
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0102 family.
 
  
 0.800
EL26_00920
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.711
ruvC
Holliday junction resolvase; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.
  
   
 0.533
EL26_00005
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.516
EL26_12480
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.516
EL26_12490
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.495
EL26_10050
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.427
EL26_10055
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family.
   
   0.427
Your Current Organism:
Tumebacillus flagellatus
NCBI taxonomy Id: 1157490
Other names: CGMCC 1.12170, DSM 25748, T. flagellatus, Tumebacillus flagellatus Wang et al. 2013, Tumebacillus sp. NFB, strain GST4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.