STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ilvEBranched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. (301 aa)    
Predicted Functional Partners:
EL26_08115
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.939
ilvE-2
Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
  
 
0.900
EL26_14295
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.858
EL26_10925
hydroxymethylglutaryl-CoA lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.852
EL26_14970
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.832
EL26_13465
Anthranilate synthase; trpE(G); catalyzes the formation of anthranilate from chorismate and glutamine; contains both component I and II; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.817
EL26_23535
Prephenate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.810
EL26_07520
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.806
EL26_11890
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.806
EL26_14315
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.806
Your Current Organism:
Tumebacillus flagellatus
NCBI taxonomy Id: 1157490
Other names: CGMCC 1.12170, DSM 25748, T. flagellatus, Tumebacillus flagellatus Wang et al. 2013, Tumebacillus sp. NFB, strain GST4
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