STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EL26_15635ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology. (699 aa)    
Predicted Functional Partners:
EL26_15365
DNA-directed RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.852
EL26_00005
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.736
EL26_10435
Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
  0.733
EL26_15875
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.670
EL26_20980
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.664
EL26_02075
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.634
EL26_03805
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.622
EL26_20120
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
0.543
EL26_21000
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.539
EL26_14575
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.531
Your Current Organism:
Tumebacillus flagellatus
NCBI taxonomy Id: 1157490
Other names: CGMCC 1.12170, DSM 25748, T. flagellatus, Tumebacillus flagellatus Wang et al. 2013, Tumebacillus sp. NFB, strain GST4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.