STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EL26_18665Heme response regulator HssR; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa)    
Predicted Functional Partners:
EL26_00005
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.975
EL26_18660
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.974
EL26_20980
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.967
EL26_20120
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.944
EL26_15875
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
0.935
EL26_02750
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.917
EL26_06780
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.901
EL26_02375
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.897
EL26_11650
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.897
EL26_00050
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.896
Your Current Organism:
Tumebacillus flagellatus
NCBI taxonomy Id: 1157490
Other names: CGMCC 1.12170, DSM 25748, T. flagellatus, Tumebacillus flagellatus Wang et al. 2013, Tumebacillus sp. NFB, strain GST4
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