STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EL26_21745Hemin ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa)    
Predicted Functional Partners:
EL26_00035
Multidrug ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.996
EL26_21750
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.996
EL26_00045
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.961
EL26_14180
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.927
EL26_14545
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.872
EL26_02295
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
    0.802
nikC
Nickel transporter permease NikC; With NikABDE is involved in nickel transport into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
    0.799
EL26_18295
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.792
EL26_01605
Arginine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.789
EL26_23280
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.784
Your Current Organism:
Tumebacillus flagellatus
NCBI taxonomy Id: 1157490
Other names: CGMCC 1.12170, DSM 25748, T. flagellatus, Tumebacillus flagellatus Wang et al. 2013, Tumebacillus sp. NFB, strain GST4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.