STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000373645_03359Unannotated protein. (344 aa)    
Predicted Functional Partners:
GCA_000373645_01888
Unannotated protein.
  
  
 0.920
GCA_000373645_05316
Unannotated protein.
  
 
 
 0.907
GCA_000373645_00942
Unannotated protein.
  
 
 0.891
GCA_000373645_00941
Unannotated protein.
  
 
 0.882
GCA_000373645_03358
Unannotated protein.
 
 
 0.882
GCA_000373645_00172
Unannotated protein.
 
 
 0.842
GCA_000373645_00877
Unannotated protein.
  
 
 0.836
GCA_000373645_02987
Unannotated protein.
 
 
 0.775
GCA_000373645_01310
Unannotated protein.
 
 
 0.748
GCA_000373645_02216
Unannotated protein.
  
  
 0.735
Your Current Organism:
Streptomyces sp. ATexABD23
NCBI taxonomy Id: 1157635
Other names: S. sp. ATexAB-D23, Streptomyces sp. ATexAB-D23
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.