Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SJZ40654.1 | SJZ40677.1 | SAMN02745119_00505 | SAMN02745119_00506 | Hypothetical protein. | Hypothetical protein; Belongs to the pirin family. | 0.705 |
SJZ40654.1 | SKA19105.1 | SAMN02745119_00505 | SAMN02745119_03061 | Hypothetical protein. | Hypothetical protein. | 0.541 |
SJZ40654.1 | tolB | SAMN02745119_00505 | SAMN02745119_00198 | Hypothetical protein. | TolB protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.541 |
SJZ40677.1 | SJZ40654.1 | SAMN02745119_00506 | SAMN02745119_00505 | Hypothetical protein; Belongs to the pirin family. | Hypothetical protein. | 0.705 |
SKA19105.1 | SJZ40654.1 | SAMN02745119_03061 | SAMN02745119_00505 | Hypothetical protein. | Hypothetical protein. | 0.541 |
tolB | SJZ40654.1 | SAMN02745119_00198 | SAMN02745119_00505 | TolB protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | Hypothetical protein. | 0.541 |