STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ45284.1Uncharacterized peroxidase-related enzyme; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (197 aa)    
Predicted Functional Partners:
SJZ45300.1
Pimeloyl-ACP methyl ester carboxylesterase.
 
 0.932
SJZ45340.1
Hypothetical protein.
 
   
 0.849
SJZ45315.1
Hypothetical protein.
 
     0.793
cysC
Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
   
  
 0.690
SJZ45610.1
4-carboxymuconolactone decarboxylase.
    
 0.635
SKA02707.1
Acyl transferase domain-containing protein.
 
   
 0.587
SKA23407.1
Peroxiredoxin.
 
   
 0.559
SJZ45247.1
Transcriptional regulator containing GAF, AAA-type ATPase, and DNA-binding Fis domains.
     
 0.502
SJZ55874.1
Pimeloyl-ACP methyl ester carboxylesterase.
   
 
 0.473
SJZ79726.1
Pimeloyl-ACP methyl ester carboxylesterase.
   
 
 0.473
Your Current Organism:
Geobacter thiogenes
NCBI taxonomy Id: 115783
Other names: ATCC BAA-34, G. thiogenes, Geobacter thiogenes (De Wever et al. 2001) Nevin et al. 2007, JCM 14045, Trichlorobacter thiogenes, Trichlorobacter thiogenes De Wever et al. 2001, strain K1
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