STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ91772.1Hypothetical protein. (64 aa)    
Predicted Functional Partners:
SJZ91723.1
Hypothetical protein.
       0.613
SJZ91748.1
Hypothetical protein.
       0.613
SJZ91797.1
Hypothetical protein.
       0.437
SJZ91815.1
Hypothetical protein.
       0.437
SJZ91835.1
Hypothetical protein.
       0.429
SJZ91863.1
Hypothetical protein.
       0.424
SJZ91885.1
Hypothetical protein.
       0.424
SJZ91906.1
Hypothetical protein.
       0.424
SJZ91926.1
Hypothetical protein.
       0.424
Your Current Organism:
Geobacter thiogenes
NCBI taxonomy Id: 115783
Other names: ATCC BAA-34, G. thiogenes, Geobacter thiogenes (De Wever et al. 2001) Nevin et al. 2007, JCM 14045, Trichlorobacter thiogenes, Trichlorobacter thiogenes De Wever et al. 2001, strain K1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.