STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ93089.1Transcriptional regulator, ArsR family. (111 aa)    
Predicted Functional Partners:
SJZ93084.1
Rhodanese-related sulfurtransferase.
  
  
 0.789
SJZ93066.1
Small redox-active disulfide protein 2.
 
   
 0.787
SJZ93099.1
Cobalt-zinc-cadmium efflux system protein.
     
 0.749
SJZ93054.1
Hypothetical protein.
  
  
 0.741
SJZ93093.1
Cation efflux family protein.
     
 0.736
SJZ93102.1
BFD-like [2Fe-2S] binding domain-containing protein.
       0.705
SJZ93078.1
Protein of unknown function.
       0.694
SKA12546.1
Transcriptional regulator, ArsR family.
  
     0.658
SJZ82383.1
Cu+-exporting ATPase.
  
  
 0.649
SKA12155.1
3-mercaptopyruvate sulfurtransferase SseA, contains two rhodanese domains.
 
 
 0.506
Your Current Organism:
Geobacter thiogenes
NCBI taxonomy Id: 115783
Other names: ATCC BAA-34, G. thiogenes, Geobacter thiogenes (De Wever et al. 2001) Nevin et al. 2007, JCM 14045, Trichlorobacter thiogenes, Trichlorobacter thiogenes De Wever et al. 2001, strain K1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.