Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SJZ97407.1 | SJZ97416.1 | SAMN02745119_02200 | SAMN02745119_02201 | Putative pyruvate formate lyase activating enzyme. | Rubrerythrin. | 0.773 |
| SJZ97407.1 | SJZ97438.1 | SAMN02745119_02200 | SAMN02745119_02202 | Putative pyruvate formate lyase activating enzyme. | Hypothetical protein. | 0.773 |
| SJZ97407.1 | SJZ97503.1 | SAMN02745119_02200 | SAMN02745119_02205 | Putative pyruvate formate lyase activating enzyme. | Hybrid cluster protein-associated redox disulfide domain-containing protein. | 0.471 |
| SJZ97407.1 | carA | SAMN02745119_02200 | SAMN02745119_02199 | Putative pyruvate formate lyase activating enzyme. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.757 |
| SJZ97407.1 | carB | SAMN02745119_02200 | SAMN02745119_02203 | Putative pyruvate formate lyase activating enzyme. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.500 |
| SJZ97407.1 | greA | SAMN02745119_02200 | SAMN02745119_02204 | Putative pyruvate formate lyase activating enzyme. | Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | 0.492 |
| SJZ97407.1 | pyrC | SAMN02745119_02200 | SAMN02745119_02198 | Putative pyruvate formate lyase activating enzyme. | Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. | 0.684 |
| SJZ97416.1 | SJZ97407.1 | SAMN02745119_02201 | SAMN02745119_02200 | Rubrerythrin. | Putative pyruvate formate lyase activating enzyme. | 0.773 |
| SJZ97416.1 | SJZ97438.1 | SAMN02745119_02201 | SAMN02745119_02202 | Rubrerythrin. | Hypothetical protein. | 0.773 |
| SJZ97416.1 | SJZ97503.1 | SAMN02745119_02201 | SAMN02745119_02205 | Rubrerythrin. | Hybrid cluster protein-associated redox disulfide domain-containing protein. | 0.471 |
| SJZ97416.1 | carA | SAMN02745119_02201 | SAMN02745119_02199 | Rubrerythrin. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.752 |
| SJZ97416.1 | carB | SAMN02745119_02201 | SAMN02745119_02203 | Rubrerythrin. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.480 |
| SJZ97416.1 | greA | SAMN02745119_02201 | SAMN02745119_02204 | Rubrerythrin. | Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | 0.480 |
| SJZ97416.1 | pyrC | SAMN02745119_02201 | SAMN02745119_02198 | Rubrerythrin. | Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. | 0.674 |
| SJZ97438.1 | SJZ97407.1 | SAMN02745119_02202 | SAMN02745119_02200 | Hypothetical protein. | Putative pyruvate formate lyase activating enzyme. | 0.773 |
| SJZ97438.1 | SJZ97416.1 | SAMN02745119_02202 | SAMN02745119_02201 | Hypothetical protein. | Rubrerythrin. | 0.773 |
| SJZ97438.1 | SJZ97503.1 | SAMN02745119_02202 | SAMN02745119_02205 | Hypothetical protein. | Hybrid cluster protein-associated redox disulfide domain-containing protein. | 0.473 |
| SJZ97438.1 | carA | SAMN02745119_02202 | SAMN02745119_02199 | Hypothetical protein. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.757 |
| SJZ97438.1 | carB | SAMN02745119_02202 | SAMN02745119_02203 | Hypothetical protein. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.507 |
| SJZ97438.1 | greA | SAMN02745119_02202 | SAMN02745119_02204 | Hypothetical protein. | Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | 0.497 |
page 1 of 3