STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA04086.1Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. (398 aa)    
Predicted Functional Partners:
SKA04107.1
Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
 
 
 0.990
SJZ66209.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
    
 0.967
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
 
   
 0.927
SKA04071.1
Carboxyl-terminal processing protease; Belongs to the peptidase S41A family.
  
  
 0.821
SJZ89190.1
PAS domain S-box-containing protein.
  
 
  0.782
SJZ60343.1
PAS domain S-box-containing protein.
  
 
 0.779
SJZ80743.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
    
 0.769
SJZ76345.1
CHAT domain-containing protein.
  
 0.767
SJZ83937.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
    
  0.763
SKA23974.1
PAS domain S-box-containing protein.
    
 0.756
Your Current Organism:
Geobacter thiogenes
NCBI taxonomy Id: 115783
Other names: ATCC BAA-34, G. thiogenes, Geobacter thiogenes (De Wever et al. 2001) Nevin et al. 2007, JCM 14045, Trichlorobacter thiogenes, Trichlorobacter thiogenes De Wever et al. 2001, strain K1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.